Intro¶
In [1]:
city = 'lisboa'
month = '201909'
filename_in = 'src/data/' + city + '-' + month + '-listings-CLEAN.csv'
In [2]:
import math
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
from IPython.display import display, HTML
import featuretools as ft
import uuid
import s2sphere as s2
import random
import catboost as cb
from kmodes.kmodes import KModes
from sklearn.ensemble import RandomForestRegressor
from sklearn.preprocessing import StandardScaler
from sklearn.pipeline import Pipeline
from sklearn.model_selection import train_test_split, GridSearchCV, cross_val_score, cross_val_predict
from sklearn.metrics import r2_score, mean_squared_error, mean_absolute_error
import scipy.spatial as spatial
import plotly.express as px
import chart_studio.plotly as py
import plotly.graph_objs as go
from plotly.offline import iplot, init_notebook_mode
import shap
%run src/utils.py
In [3]:
coefs = {}
metrics = {}
def collect_results(columns, model, method, r2, mae, mse, skip_coef=True):
# coefs
if skip_coef != True:
method_coefs = {}
if hasattr(model, '__intercept'):
method_coefs['__intercept'] = model.intercept_
for i in range(len(columns.values)):
method_coefs[columns.values[i]] = abs(model.coef_[i])
coefs[method] = method_coefs
df_coefs = pd.DataFrame(coefs)
df_coefs = df_coefs.sort_values(by=method, ascending=False)
display(df_coefs)
# metrics
metrics[method] = {
'R2':r2.round(3),
'MAE':mae.round(3),
'MSE':mse.round(3)
}
display(pd.DataFrame(metrics))
def print_feature_importances(method, importances, df):
feature_score = pd.DataFrame(list(zip(df.dtypes.index, importances)), columns=['Feature','Score'])
feature_score = feature_score.sort_values(by='Score',
ascending=True,
inplace=False,
kind='quicksort',
na_position='last')
fig = go.Figure(
go.Bar(
x=feature_score['Score'],
y=feature_score['Feature'],
orientation='h'
)
)
fig.update_layout(
title=method + " Feature Importance Ranking",
height=25*len(feature_score)
)
fig.show()
Carga del dataset¶
In [4]:
df = pd.read_csv(filename_in)
df.info()
Descarte de características¶
In [5]:
# TO-DO explicar
useful_cols = [
'accommodates',
'bathrooms',
'bedrooms',
'cancellation_policy',
'cleaning_fee',
'extra_people',
'guests_included',
'has_air_conditioning',
'has_bed_linens',
'has_coffee_maker',
'has_cooking_basics',
'has_dishes_and_silverware',
'has_elevator',
'has_essentials',
'has_family/kid_friendly',
'has_first_aid_kit',
'has_hair_dryer',
'has_hangers',
'has_heating',
'has_hot_water',
'has_iron',
'has_kitchen',
'has_laptop_friendly_workspace',
'has_license',
'has_long_term_stays_allowed',
'has_microwave',
'has_no_stairs_or_steps_to_enter',
'has_oven',
'has_refrigerator',
'has_shampoo',
'has_stove',
'has_tv',
'has_washer',
'has_wifi',
'instant_bookable',
'latitude',
'longitude',
'maximum_nights_avg_ntm',
'minimum_nights_avg_ntm',
'neighbourhood',
'price',
'property_type',
'room_type',
'security_deposit'
]
useless_cols = [
'district',
'income_med_occupation',
'activity_months',
'host_response_time',
'host_verified_by_phone',
'host_verified_by_email',
'host_verified_by_government_id',
'host_verified_by_reviews',
'host_verified_by_jumio',
'host_verified_by_offline_government_id',
'host_verified_by_selfie',
'host_verified_by_identity_manual',
'host_verified_by_facebook',
'host_verified_by_work_email',
'host_verified_by_google',
'first_review',
'last_review',
'number_of_reviews',
'number_of_reviews_ltm',
'review_scores_rating',
'review_scores_accuracy',
'review_scores_cleanliness',
'review_scores_checkin',
'review_scores_communication',
'review_scores_location',
'review_scores_value',
'reviews_per_month'
]
highly_corr_cols = [
'has_refrigerator',
'host_verified_by_selfie'
]
df.drop([*useless_cols, *highly_corr_cols], axis=1, errors='ignore', inplace=True)
df.shape
Out[5]:
Nuevas características de localización calculadas¶
Distancia a puntos de interés¶
Se calcula para cada propiedad la distancia en kilómetros a diferentes puntos de interés turÃstico de la ciudad.
In [6]:
pois = [
{'name':'rossio', 'coord':(38.71398, -9.13825)},
{'name':'jeronimos', 'coord':(38.69778, -9.20611)},
{'name':'torre-belem', 'coord':(38.6916, -9.2160)},
{'name':'m-pombal', 'coord':(38.723546, -9.149648)},
{'name':'barrio-alto', 'coord':(38.7128, -9.1451)},
{'name':'praca-do-comercio', 'coord':(38.7075, -9.1364)},
{'name':'airport', 'coord':(38.7756, -9.1354)}
]
In [7]:
for poi in pois:
df['dist_' + poi['name']] = df.apply(
lambda r: get_haversine_distance(
r['latitude'],
r['longitude'],
poi['coord']),
axis=1)
Clustering de barrios¶
La caracterÃstica neighbourhood tiene una cardinalidad muy alta que puede conducir a sobreajuste puesto que en algunos barrios hay pocos datos. Se propone, utilizando clusterización, una caracterÃstica de cardinalidad intermedia entre barrios y distritos que agrupe barrios similares y que resulte más representativa para el estudio.
In [8]:
km = KModes(n_clusters=15, init='Huang', n_init=10, random_state=42)
df['nb_cluster'] = km.fit_predict(df[['price_med_occupation_per_accommodate', 'neighbourhood']])
clusters = df['nb_cluster'].copy()
df['nb_cluster'] = df['nb_cluster'].apply(lambda x: 'nb_' + str(x))
df.drop(['price_med_occupation_per_accommodate'], axis=1, inplace=True) # solo era para calcular clusters
In [9]:
cluster_map = pd.DataFrame(list(zip(df['neighbourhood'], clusters)), columns=['nb', 'cluster'])
cluster_map.drop_duplicates(inplace=True)
with open('src/geo/' + city + '.neighbourhoods.geojson') as f:
city_nb = fix_geojson(json.load(f))
fig = go.Figure(go.Choroplethmapbox(
geojson=city_nb,
locations=cluster_map['nb'],
z=cluster_map['cluster'],
colorscale=px.colors.qualitative.Vivid,
marker_opacity=0.5,
marker_line_width=0.2
))
fig.update_layout(
mapbox_style='carto-positron',
mapbox_zoom=11,
mapbox_center={'lat':df['latitude'].mean(), 'lon':df['longitude'].mean()},
margin={"r":0,"t":0,"l":0,"b":0},
title='clusters',
showlegend=False
)
fig.show()
Celdas S2¶
In [10]:
def get_s2(lat, lng):
py_cellid = s2.CellId.from_lat_lng(
s2.LatLng.from_degrees(lat, lng)
)
py_cellid = py_cellid.parent(12)
return 's2_' + str(py_cellid.id())
df['s2'] = df.apply(lambda r: get_s2(r['latitude'], r['longitude']), axis=1)
In [11]:
df_s2 = df[['s2', 'latitude', 'longitude']]
s2_cells = sorted(df_s2['s2'].unique())
random.shuffle(s2_cells)
df_s2['idx'] = df_s2['s2'].apply(lambda x: s2_cells.index(x))
In [12]:
fig314 = go.Figure()
fig314.add_trace(go.Scattermapbox(
lon=df_s2['longitude'],
lat=df_s2['latitude'],
mode='markers',
marker_color=df_s2['idx'],
text=df_s2['idx'],
marker=dict(
size=5,
opacity=0.4,
colorscale='spectral'
)
))
fig314.update_layout(
showlegend=False,
mapbox_style='carto-positron',
mapbox_zoom=11,
mapbox_center={'lat':df['latitude'].mean(), 'lon':df['longitude'].mean()},
margin={"r":0,"t":0,"l":0,"b":0}
)
fig314.show()
Regiones Voronoi¶
In [13]:
poi_coords = list(map(lambda x: x['coord'], pois))
vor = spatial.Voronoi(poi_coords)
def get_voronoi_index(row):
new_point = [row['latitude'], row['longitude']]
point_index = np.argmin(np.sum((vor.points - new_point)**2, axis=1))
return 'v_' + str(point_index)
df['voronoi'] = df.apply(lambda r: get_voronoi_index(r), axis=1)
spatial.voronoi_plot_2d(vor)
Out[13]:
In [14]:
df_voronoi = df[['voronoi', 'latitude', 'longitude']]
voronoi_cells = sorted(df_voronoi['voronoi'].unique())
df_voronoi['idx'] = df_voronoi['voronoi'].apply(lambda x: voronoi_cells.index(x))
In [15]:
fig315 = go.Figure()
fig315.add_trace(go.Scattermapbox(
lon=df_voronoi['longitude'],
lat=df_voronoi['latitude'],
mode='markers',
marker_color=df_voronoi['idx'],
text=df_voronoi['idx'],
marker=dict(
size=5,
opacity=0.4,
colorscale='spectral'
)
))
fig315.add_trace(
go.Scattermapbox(
lat=list(map(lambda x: x['coord'][0], pois)),
lon=list(map(lambda x: x['coord'][1], pois)),
text=list(map(lambda x: x['name'], pois)),
mode='markers',
marker=dict(
size=8,
opacity=0.9,
color='black'
)
)
)
fig315.update_layout(
showlegend=False,
mapbox_style='carto-positron',
mapbox_zoom=11,
mapbox_center={'lat':df['latitude'].mean(), 'lon':df['longitude'].mean()},
margin={"r":0,"t":0,"l":0,"b":0}
)
fig315.show()
Conversión de características categóricas en dummies¶
In [16]:
print(df.shape)
dfd = pd.get_dummies(df)
print(dfd.shape)
target = 'price'
features = list(dfd.columns)
features.remove(target)
Partición en conjuntos de entrenamiento y test¶
In [17]:
x_train, x_test, y_train, y_test = train_test_split(
dfd[features],
dfd[target],
test_size=0.3,
random_state=42
)
x_train = x_train.astype(float) # prevent conversion warnings
Modelo base: Random Forest¶
In [18]:
def eval_model(method, cols, df):
model = RandomForestRegressor(random_state=42, n_estimators=200)
regressor = Pipeline([('model', model)])
regressor.fit(x_train[cols], y_train)
y_pred = regressor.predict(x_test[cols])
r2 = r2_score(y_test, y_pred)
mae = mean_absolute_error(y_test, y_pred)
mse = mean_squared_error(y_test, y_pred)
collect_results(cols, model, method, r2, mae, mse, skip_coef=True)
importances = regressor.named_steps['model'].feature_importances_
print_feature_importances(method, importances, df[cols])
return y_pred
Estudio de la localización¶
In [19]:
neighbourhood_cols = [col for col in dfd if col.startswith('neighbourhood')]
dist_cols = [col for col in dfd if col.startswith('dist_')]
coord_cols = ['latitude', 'longitude']
nb_cluster_cols = [col for col in dfd if col.startswith('nb_cluster_')]
s2_cols = [col for col in dfd if col.startswith('s2_')]
voronoi_cols = [col for col in dfd if col.startswith('voronoi')]
Modelo sin variable geográfica¶
Este modelo registrarÃa toda la variabilidad de precio que es debida a las propiedades de las viviendas sin considerar caractarÃsticas geográficas de ningún tipo.
In [20]:
cols = features.copy()
for c in [*neighbourhood_cols, *dist_cols, *coord_cols, *nb_cluster_cols, *s2_cols, *voronoi_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('NO-GEO', cols, dfd)
Residuos¶
Se busca si existen zonas con un error positivo o negativo.
- Lo que se puede asociar con puntos de interés: positivo
- Zonas que los visitantes prefieren evitar: negativo
In [21]:
x_test['resid'] = y_test - y_pred
plt.hist(x_test['resid'], bins=50)
plt.show()
Residuos outliers¶
In [22]:
x_test2 = x_test.copy()
x_test2.reset_index(inplace=True)
outliers_idx = get_outliers_iqr(x_test2['resid'])[0]
remove_outliers(x_test2, outliers_idx, 'resid')
In [23]:
plt.hist(x_test2['resid'], bins=30)
plt.show()
In [24]:
fig1 = go.Figure(
go.Scattermapbox(
lon=x_test2['longitude'],
lat=x_test2['latitude'],
mode='markers',
marker_color=x_test2['resid'],
text=x_test2['resid'],
marker=dict(
opacity=0.8,
colorscale=[
[0.0, "rgb(165,0,38)"],
[0.11, "rgb(215,48,39)"],
[0.22, "rgb(244,109,67)"],
[0.33, "rgb(253,174,97)"],
[0.44, "rgb(254,224,144)"],
[0.55, "rgb(224,243,248)"],
[0.66, "rgb(171,217,233)"],
[0.77, "rgb(116,173,209)"],
[0.88, "rgb(69,117,180)"],
[1.0, "rgb(49,54,149)"]
]
)
)
)
fig1.update_layout(
mapbox_style='carto-positron',
mapbox_zoom=11,
mapbox_center={'lat':x_test2['latitude'].mean(), 'lon':x_test2['longitude'].mean()},
margin={"r":0,"t":0,"l":0,"b":0}
)
fig1.show()
Coordenadas¶
In [25]:
cols = features.copy()
for c in [*neighbourhood_cols, *dist_cols, *nb_cluster_cols, *s2_cols, *voronoi_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('COORD', cols, dfd)
Barrios¶
In [26]:
cols = features.copy()
for c in [*dist_cols, *coord_cols, *nb_cluster_cols, *s2_cols, *voronoi_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('NB', cols, dfd)
Cluster de barrios¶
In [27]:
cols = features.copy()
for c in [*neighbourhood_cols, *dist_cols, *coord_cols, *s2_cols, *voronoi_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('CLUSTER-NB', cols, dfd)
Distancias a puntos de interés¶
In [28]:
cols = features.copy()
for c in [*neighbourhood_cols, *coord_cols, *nb_cluster_cols, *s2_cols, *voronoi_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('DIST', cols, dfd)
Voronoi¶
In [29]:
cols = features.copy()
for c in [*neighbourhood_cols, *nb_cluster_cols, *coord_cols, *dist_cols, *s2_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('VORONOI', cols, dfd)
S2¶
In [30]:
cols = features.copy()
for c in [*neighbourhood_cols, *nb_cluster_cols, *coord_cols, *dist_cols, *voronoi_cols]:
if c in cols:
cols.remove(c)
y_pred = eval_model('S2', cols, dfd)
Automated feature engineering¶
In [31]:
auto_df = df.copy()
auto_df['auto_id'] = auto_df['price'].apply(lambda x: uuid.uuid1().int)
prices = auto_df['price']
auto_df.drop(['price'], axis=1, inplace=True, errors='ignore')
In [32]:
es = ft.EntitySet(id='airbnb')
es = es.entity_from_dataframe(
entity_id='main',
dataframe=auto_df,
index='auto_id'
)
In [33]:
# available_transform_primitives = ft.primitives.list_primitives()
# print(available_transform_primitives[available_transform_primitives['type'] == 'transform'])
features_df, feature_names = ft.dfs(
entityset=es,
target_entity='main',
trans_primitives=['subtract_numeric'],
max_depth=2
)
# print(features_df.columns)
In [37]:
auto_df = features_df.copy()
auto_df.reset_index()
auto_df.drop(['auto_id'], axis=1, inplace=True, errors='ignore')
auto_df = pd.get_dummies(auto_df)
print(auto_df.shape)
auto_features = list(auto_df.columns)
x_train, x_test, y_train, y_test = train_test_split(
auto_df,
prices,
random_state=42
)
x_train = x_train.astype(float) # prevent conversion warnings
In [38]:
y_pred = eval_model('AUTO-FT', auto_features, auto_df)